Class: GenomeFeature

A feature localized to an interval along a genome

URI: gff:GenomeFeature

Referenced by class

• None Derives from _0.. GenomeFeature*
• None Parent _0.. GenomeFeature*
• None ➞features _0.. GenomeFeature*

Attributes

Own

• end _REQ
  • Description: The end of the feature in positive 1-based integer coordinates
  • range: Integer
• has attributes _OPT
  • range: GenomeFeatureAttributeSet
• phase _OPT
  • Description: The phase for a coding sequence entity. For example, phase of a CDS as represented in a GFF3 with a value of 0, 1 or 2.
  • range:
• seqid _REQ
  • Description: The ID of the landmark used to establish the coordinate system for the current feature.
  • range: Seq
• source _REQ
  • Description: The source is a free text qualifier intended to describe the algorithm or operating procedure that generated this feature.
  • range: String
• start _REQ
  • Description: The start of the feature in positive 1-based integer coordinates
  • range: Integer
• strand _OPT
  • Description: The strand on which a feature is located. Has a value of '+' (sense strand or forward strand) or '-' (anti-sense strand or reverse strand).
  • range:
• type _OPT
  • Description: A type from the sequence ontology slot_uri: rdf:type
  • range: ControlledTermType

Other properties

See also:		https://github.com/The-Sequence-Ontology/Specifications/blob/master/gff3.md