Class: simple gaf association

URI: ontology_association:SimpleGafAssociation

Parents

• is_a: GafAssociation - line of GAF

Referenced by Class

Attributes

Own

• simple gaf association➞qualifiers _0..*
  • Range: simple_qualifier_enum

Inherited from gaf association:

• db _1..1
  • Description: db part of identifier
  • Range: String
• local id _1..1
  • Description: local part of identifier
  • Range: String
• db object symbol _1..1
  • Range: SymbolType
  • Example: AMOT None
• gaf association➞ontology class ref _1..1
  • Description: this must be a GO ID
  • Range: OntologyClass
  • Example: GO:0050803 None
• supporting references _1..*
  • Range: Publication
• evidence type _1..1
  • Range: OntologyClass
• with or from _0..*
  • Range: Entity
  • Example: WB:WBVar00000510 None
• gaf association➞aspect _1..1
  • Description: varies by association type
  • Range: gene_ontology_aspect_enum
• db object name _0..1
  • Range: NameType
  • Example: Angiomotin None
• db object synonyms _0..*
  • Range: NameType
  • Example: Angiomotin None
• gaf association➞db object type _0..1
  • Range: gp_entity_type_enum
  • Example: PR:000000001 None
• db object taxon _1..1
  • Range: Taxon
  • Example: NCBITaxon:9606 None
• annotation date _0..1
  • Description: date when annotation was made
  • Range: Datetime
• assigned by _1..1
  • Description: assigned by
  • Range: Provider
• annotation extensions _0..*
  • Description: disjunction
  • Range: AnnotationExtension
  • Example: BFO:0000066(GO:0005829) None
• gene product form _0..1
  • Description: isoform
  • Range: BiologicalEntity